Aqualogreadr: Difference between revisions

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===Purpose===
===Purpose===


Reads JYHoriba Floromax ASCII files in as a DataSet Object.
Reads Horiba JY Aqualog files with Raleigh removal.


===Synopsis===
===Synopsis===


:out = fluoromaxreadr(file,options);
:out = aqualogreadr(file,options);


====Inputs====
====Inputs====
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* '''waitbar''' : [ 'off' |{'on'}] Governs use of waitbars to show progress.
* '''waitbar''' : [ 'off' |{'on'}] Governs use of waitbars to show progress.
* '''scattercorrection''' : [ 'off' | {'on'}] calls FLUCUT.M for Rayleigh correction.
* '''scattercorrection''' : [ {'off'} | 'on'] calls [[flucut]] for Rayleigh correction.
* '''flucut''' : FLUCUT options field for governing calls to [[flucut|FLUCUT]].
* '''flucut''' : [[flucut|FLUCUT]] options field for governing calls to [[flucut|FLUCUT]].
* '''LowZero''' : Input (LowZero) to [[flucut|FLUCUT]].
** '''LowZero''' : Option (LowZero) for [[flucut|FLUCUT]].
** '''TopZero''' : Option (TopZero) for [[flucut|FLUCUT]].
* '''LowMiss''' : Input (LowMiss) to [[flucut|FLUCUT]].
* '''LowMiss''' : Input (LowMiss) to [[flucut|FLUCUT]].
* '''TopZero''' : Input (TopZero) to [[flucut|FLUCUT]].
* '''TopMiss''' : Input (FopMiss) to [[flucut|FLUCUT]].
* '''TopMiss''' : Input (FopMiss) to [[flucut|FLUCUT]].
* '''xclreadr''' : XCLREADR options field for governing calls to [[xclreadr|XCLREADR]].
* '''textreadr''' : TEXTREADR options field for governing calls to [[textreadr|TEXTREADR]].
* '''nonmatching''' : [{'error'}| 'cell' ] Governs handling non-matching data from multiple files.


===See Also===
===See Also===


[[areadr]], [[dataset]], [[flucut]], [[spcreadr]], [[xclreadr]], [[xlsreadr]]
[[Data Importing Formats]], [[hjyreadr]], [[jascoeemreadr]], [[jcampreadr]],
[[spcreadr]], [[writespc]], [[xclreadr]]

Latest revision as of 10:38, 24 July 2017

Purpose

Reads Horiba JY Aqualog files with Raleigh removal.

Synopsis

out = aqualogreadr(file,options);

Inputs

  • file = One of the following identifications of files to read:
  • A single string identifying the file to read
('example')
  • A cell array of strings giving multiple files to read
({'example_a' 'example_b' 'example_c'})
  • An empty array indicating that the user should be prompted to locate the file(s) to read
([])

Outputs

  • out = A DataSet object with date, time, info (data from cell (1,1)), variable names (vars), sample names (samps), and data matrix (data).

Options

options = a structure array with the following fields:

  • waitbar : [ 'off' |{'on'}] Governs use of waitbars to show progress.
  • scattercorrection : [ {'off'} | 'on'] calls flucut for Rayleigh correction.
  • flucut : FLUCUT options field for governing calls to FLUCUT.
    • LowZero : Option (LowZero) for FLUCUT.
    • TopZero : Option (TopZero) for FLUCUT.
  • LowMiss : Input (LowMiss) to FLUCUT.
  • TopMiss : Input (FopMiss) to FLUCUT.
  • textreadr : TEXTREADR options field for governing calls to TEXTREADR.
  • nonmatching : [{'error'}| 'cell' ] Governs handling non-matching data from multiple files.

See Also

Data Importing Formats, hjyreadr, jascoeemreadr, jcampreadr, spcreadr, writespc, xclreadr