Particle Analysis Window and Release Notes Version 6 7: Difference between pages

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The Particle Analysis window is an interface into the [[analyzeparticles]] function. Included in the interface are controls for adjusting settings for the particle analysis and exploring the results. Once the particle analysis is complete you can export the resulting image and or table to [[analysis]]. When an image is exported to analysis, the particles identified by Particle Analysis are identified in class-sets associated with each particle. One classset has a class for each particle. Pixels within particle j have class = j. Non particle pixels have class = 0. Second classset has one class for all particles. Pixels within any particle have class = 1. Non particle pixels have class = 0.


==Interface==
The Particle Analysis interface has three main areas for the image, particle table, and analysis function settings. The basic workflow:
# Load image data.
# Adjust function settings.
# Run the particle analysis.
# Explore the results.
# Repeat steps 2-4 until you have the desired results.
# Save or export your results.


Version 6.7 of PLS_Toolbox and Solo was released in March, 2012.


[[Image:Particlegui.png|border|600px|Particle Analysis Interface]]
For general product information, see [http://www.eigenvector.com/software/pls_toolbox.htm PLS_Toolbox Product Page]. For information on Solo, see [http://www.eigenvector.com/software/solo.htm Solo Product Page].


==Menu==
(back to [[Release Notes PLS Toolbox and Solo]])
* File
** Load Workspace Image - Load image data (numeric or DataSet) from the Workspace.
** Import Image - Load an image from a supported file [[Image_File_Readers |format]].
** Save Image - Save image to file or workspace.
** Save Table Data - Save particle table data to file or workspace.
** Clear Data - Clear image and particle table.
** Close - Close Particle Analysis window without saving data.
* Edit
** Particle GUI Options - Optional settings for Particle Analysis interface.
** Particle Analysis Options - Optional settings for the Particle Analysis function. Note that most of these settings are available in the Settings area of the window.
*Help
** Particle Analysis Help - Opens this page.
** PLS_Toolbox Help - Opens main help page for PLS_Toolbox.
==Toolbar==
From left to right in the image above the toolbar buttons are:
* Lambda - Opens the Workspace Browser.
* A/B Box - Open function options.
* Gears - Runs particle analysis using the current settings.
* Check Box - Toggles all the selected particles.
* Layers - Changes the background alpha color of the particles. Cycles through Black, White, and Red and can be used to enhance appearance of particles.
* Table Export - Export the particle table to [[analysis]].
* Image Export - Export the image to [[analysis]].
* Read X - Close the window without saving.


==Settings==
==NEW FEATURES==


===Design Of Experients (DOE) Tools===
* bla


For a detailed explanation of the function setting see [[analyzeparticles]]. Additional settings can be found using Edit>Particle Analysis Options.
===Other Method Improvements===
* bla
 
===Preprocessing===
* bla
 
===Import / Export===
* bla
 
===DataSet Editor===
* bla


==Image==
===Plot Controls===
Depending on the settings, the image displays particles as regions masked with a semitransparent layer (alpha mask) either over each particle or over the non-particle region. The background color can be adjusted (using the toolbar button) to emphasize the regions.
* Selectable plot themes. [[Image:Figbg_color.gif|thumb|| ]]
* bla


==Particle Table==
===[[AnalysisWindow_Layout|Analysis Window]]===
The Particle Table has two particle selection methods. First, you can check/uncheck particles in the Show column. This will turn on/off the particle as show by the alpha mask. You can also select the "row header" (integer row number). This will draw an outline around the particle (see image above).
* Show CV results for confusion table when available.
* Improved [[modelcache]] performance and string handling.
 
===[[WorkspaceBrowser_Layout|Workspace Browser]] ===
* Drag Drop - Enable dragging and dropping of system files onto the Browser window as well as to Analysis window. Enhanced highlighting of drop location.
 
===Command-line Tool Changes===
* bla
 
 
==NEW FUNCTIONS AND FILES==
 
*''Full Support for Matlab R2012a''
 
===Misc New Functions===
:[[autoexport]] - Exports a DataSet object to a file of the specified format.
:[[classsummary]] - List class and axisscale distributions for a DataSet.
:[[figuretheme]] - Resets a figure background and axes to a specified color.
:[[meantrimmed]] - Trimmed mean.
:[[mediantrimmed]] - Trimmed median.
:[[windowfilter]] - Spectral filtering.
 
===Design of Analysis Tools===
:[[anovadoe]]        - Function to perform ANOVA for 2^k factorial model X, Y data
 
===Other Changes===
 
:[[crossval]] - improved display of classification results, improved integration with model input

Revision as of 10:36, 7 March 2012


Version 6.7 of PLS_Toolbox and Solo was released in March, 2012.

For general product information, see PLS_Toolbox Product Page. For information on Solo, see Solo Product Page.

(back to Release Notes PLS Toolbox and Solo)

NEW FEATURES

Design Of Experients (DOE) Tools

  • bla

Other Method Improvements

  • bla

Preprocessing

  • bla

Import / Export

  • bla

DataSet Editor

  • bla

Plot Controls

Analysis Window

  • Show CV results for confusion table when available.
  • Improved modelcache performance and string handling.

Workspace Browser

  • Drag Drop - Enable dragging and dropping of system files onto the Browser window as well as to Analysis window. Enhanced highlighting of drop location.

Command-line Tool Changes

  • bla


NEW FUNCTIONS AND FILES

  • Full Support for Matlab R2012a

Misc New Functions

autoexport - Exports a DataSet object to a file of the specified format.
classsummary - List class and axisscale distributions for a DataSet.
figuretheme - Resets a figure background and axes to a specified color.
meantrimmed - Trimmed mean.
mediantrimmed - Trimmed median.
windowfilter - Spectral filtering.

Design of Analysis Tools

anovadoe - Function to perform ANOVA for 2^k factorial model X, Y data

Other Changes

crossval - improved display of classification results, improved integration with model input
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